rba_Rhodopirellula_baltica
Gene Id E-val Gene Description Promoter COGs COGs clasification COG Description
rba-RB4500 0.063 Hypothetical protein-transmembrane predi CTTGGCACACCGTTTGCCTTTGatgtacttccgcggcaatgacgcgaatcacttaactcggtcgggcgaccagccgcttcctcgatccaatccaaattgagaaccaaATG ROG3772 - -
rba-RB5198 0.31 Probable fructokinase AATGGCACATCGATTGCTTCGAgttgctcccgaatttgtttcatcgaagctacggcggcatcatccccgtcgagcggcaagaacgttccgtctaaatccgttgccaagacttttggtggcaaggacgtgatggaaacaattcgcgaagacgtcgggttggatgcgatcgtggaattcatcgtgtaagatcagcgttgtcgcgtgaggatgatgtttgaattttcaatcagttcgctgctcaaggattacaacgcacgATG COG0524 [G] Sugar kinases/ ribokinase family
rba-RB5197 Sucrose-phosphate synthase 1 - COG0438 [M] Glycosyltransferase
rba-RB5196 Alpha-amylase/ amylosucrase - COG0366 [G] Glycosidases
rba-RB4347 0.34 Conserved hypothetical protein TCTGGCACGGTAGTTGCGACTCatcaatctcatcaagcaaccgtttgatgaaattaccaactacagcaaactgaaggatctcacATG ROG0312 - -
rba-RB3299 1.2 Hypothetical protein-putative conserved TTTGGCATTGCCTTTGCCTTTGcatgatctccgcctgagtggtgcaagtgaatgggcggagtccaaaactcactcgacgaagcgatctttcgggaaggattcttccctccttcaccttatgtttcgattgcctgtgtccaatcacgggatcgaatctctcacctaaggatttgtcgATG COG2165 [NU] Type II secretory pathway/ pseudopilin PulG
rba-RB11041 0.12 Hypothetical protein-transmembrane regio AGTGGCACGGCGAGTGCTTTTGagattgtcgttctgaacctgattgacccgcacgtattgaccattcgggggcctctgggATG COG2165 [NU] Type II secretory pathway/ pseudopilin PulG
rba-RB370 0.72 Nitrate transport ATP-binding protein TCCGGCATGACGCTTGCGATTCgctaaacctgcatcactgatgccactttaTTG COG0715 [P] ABC-type nitrate/sulfonate/bicarbonate transport systems/ periplasmic components
rba-RB372 Nitrate transport permease protein - COG0600 [P] ABC-type nitrate/sulfonate/bicarbonate transport system/ permease component
rba-RB373 Nitrate transport ATP-binding protein - COG1116 [P] ABC-type nitrate/sulfonate/bicarbonate transport system/ ATPase component
rba-RB374 Nitrate transport ATP-binding protein - COG1116 [P] ABC-type nitrate/sulfonate/bicarbonate transport system/ ATPase component
rba-RB375 Hypothetical protein - ------- - -
rba-RB377 Molybdopterin oxidoreductase/ iron sulfu - COG0437 [C] Fe-S-cluster-containing hydrogenase components 1
rba-RB378 Nitrate reductase catalytic subunit - COG3383 [R] Uncharacterized anaerobic dehydrogenase
rba-RB379 Ferredoxin--nitrite reductase - COG0155 [P] Sulfite reductase/ beta subunit (hemoprotein)
rba-RB380 Sulfite reductase [NADPH] flavoprotein a - COG2878;COG0369 [C];[P] Predicted NADH:ubiquinone oxidoreductase/ subunit RnfB;Sulfite reductase/ alpha subunit (flavoprotein)
rba-RB381 Hypothetical protein - ------- - -
rba-RB382 Hypothetical protein - ------- - -
rba-RB9360 0.16 Conserved hypothetical protein TTTGGCACAGGCGATGCTTTAGctgtgtgcaacaacaagcatctttctttgattcgagattcacATG COG1690 [S] Uncharacterized conserved protein
rba-RB9359 RNA 3-terminal phosphate cyclase (RNA-3- - COG0430 [A] RNA 3'-terminal phosphate cyclase
rba-RB3623 0.13 Hypothetical protein ATCGGCACCACGATTGCAATGAaataggttgataccacggacggggcaATG ------- - -
rba-RB10314 0.48 Conserved hypothetical protein CTTGGCACAACACGTGCTTTCCcaacgaccttctgttttcttggacgcaaccgcagaactcgctgtttcccatatgaactgaaactgacttacaaagctcaATG COG3002 [S] Uncharacterized protein conserved in bacteria
rba-RB10313 NADH subunit 5 - COG1009 [CP] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter/ MnhA subunit
rba-RB10310 NADH dehydrogenase (ubiquinone) chain M - COG0651 [CP] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter/ MnhD subunit
rba-RB10309 Xylose transporter - COG0477 [GEPR] Permeases of the major facilitator superfamily
rba-RB7578 0.007 Probable global regulator TTTGGCACTGCCGTTGCATTAGtcccccatcacaaccgcgggtcacaacggcccacttctcttaaacgactctcttctggggcaaaggaaactgccATG COG1551 [T] Carbon storage regulator (could also regulate swarming and quorum sensing)
rba-RB9813 0.06 Similar to vp80 protein ACTGGCACGAAGATTGCGTTGTtggctgtcattcgccgcaatcaatcgattcgaggatcgcttgtccgtcgcggacgcgaattgaaccgcagagttgtaaagtcgattttgaacgggtcgattcaccgcgttctccgagccatcccatccgagggaaacgaagtcatgagccaattattggaagcaacccaatctgaGTG ------- - -
rba-RB10279 0.024 Heat shock protein/ HSP20 family ATTGGCACACTCGTTGCATTTTtgaagttctcgaacgacgtcgtctgtcagattgacattcgctgtcgaatgaaactgaatcaacaaactttgcTTG COG0071 [O] Molecular chaperone (small heat shock protein)
rba-RB10283 Heat shock protein SP21 - COG0071 [O] Molecular chaperone (small heat shock protein)
rba-RB4386 0.029 Cysteine synthase ATTGGCACAGTGATTGCGTTAGcaggagcaattcaaatttTTG COG0031 [E] Cysteine synthase
rba-RB4383 Conserved hypothetical protein - COG4529 [S] Uncharacterized protein conserved in bacteria
rba-RB4382 Probable diaminopimelate decarboxylase - COG0019 [E] Diaminopimelate decarboxylase
rba-RB4381 Hypothetical protein - ------- - -
rba-RB4464 0.46 Hypothetical protein-transmembrane regio TTTGGAACGGTGTTTGCGTAGAtcctctcatcacaaattttctaccaaactgaactcggggatcgacgATG ------- - -
rba-RB4462 Hypothetical protein - ------- - -
rba-RB4461 Conserved hypothetical protein - COG0668 [M] Small-conductance mechanosensitive channel
rba-RB4460 Conserved hypothetical protein - COG4325 [S] Predicted membrane protein
rba-RB4459 Conserved hypothetical protein - COG0668 [M] Small-conductance mechanosensitive channel
rba-RB4458 Conserved hypothetical protein - COG0628 [R] Predicted permease
rba-RB4429 0.29 Conserved hypothetical protein TTTGGCCCGGCGTTTGCTTCCAcatttatcacgacgcagcaacgcgttcaTTG ROG3013 - -
rba-RB4378 0.47 Hypothetical protein ATCGGCACGTGGTTTGCGAAAGcgtggaaacgtgaaatagcgacgatgacgctcccggtgtGTG ------- - -
rba-RB4377 0.47 Putative membrane protein ATCGGCACGTGGTTTGCGAAAGcgtggaaacgtgaaatagcgacgatgacgctcccggtgtgtgcggttgttggctgttttggtcgtggggcaactcgaacccgcgtcggtgttccctacttgctacttggatgttgccatgcagttgttgtcgctcatccaattggggttcaagtttgagaccggtggtccgctttcgcaggacgcccgTTG COG0628 [R] Predicted permease
rba-RB4614 0.16 Hypothetical protein ATTGGCAAGCCGTTTGCATTGTtgaaacgatttgcatggctgcgggcagtgaacgaatATG COG1432 [S] Uncharacterized conserved protein
rba-RB4613 0.16 Conserved hypothetical protein-putative ATTGGCAAGCCGTTTGCATTGTtgaaacgatttgcatggctgcgggcagtgaacgaatatggccattgactgtttatgtcgatggaacaagttcgggcaactcgttctgtgcagttccgactcggacctaacttcaaacaactgtccatccattcacgaggatcatccgaacgATG COG0316 [S] Uncharacterized conserved protein
rba-RB548 0.71 1/4-alpha-glucan branching enzyme CGTGGCACGAGAATTGCCTTCTtcggtccggcttgagaaatttggctccggTTG COG0296 [G] 1/4-alpha-glucan branching enzyme
rba-RB2680 0.025 Similar to suppressor for copper-sensiti ATTGGCACACAACCTGCAATTCcgatgatccaccgcaacaagatttcccaccagacttttctttggatccatcatggccactgtcgatctgcactcctcggtcaaccgccaacctcaatcgcccctcaattggaggATG COG4243;COG1651 [S];[O] Predicted membrane protein;Protein-disulfide isomerase
rba-RB9569 0.57 Probable Mip ATTGGCACAGTTCGTGCCTAAGggagactcgacaccgatgatcgaattcgGTG COG2128 [S] Uncharacterized conserved protein
rba-RB9567 Conserved hypothetical protein - COG3558 [S] Uncharacterized protein conserved in bacteria
rba-RB4333 0.0024 Probable galactosyltransferase TTTGGCACGGTCGTTGCTTAAGccgaagccgacggaatcgcaaacaacatcacggatgatctgaggatcaatcacccgttaccaactccatcggctggggagccattcgcgATG COG0438 [M] Glycosyltransferase
rba-RB4336 Hypothetical protein - COG1819 [GC] Glycosyl transferases/ related to UDP-glucuronosyltransferase
rba-RB4337 Similar to glycosyl transferase - COG1216 [R] Predicted glycosyltransferases
rba-RB11008 1.3 Similar to cycloartenol synthase GCTGGCACATGGCTTGCTTTGTgaagcgatgcatggagatcgaacgcttttctttccctccttccttgagaaacacaaATG ROG3213 - -
rba-RB11260 0.88 Probable dnaK (dksA-like) supressor prot ATTGGCGCGGCAGTTGCTTCCAttggagtcatccaatccacaacgaggtgacacaATG COG1734 [T] DnaK suppressor protein
rba-RB11258 Conserved hypothetical protein - COG0398 [S] Uncharacterized conserved protein
rba-RB11255 Phosphatidate cytidylyltransferase - COG4589 [R] Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase
rba-RB11253 Probable phosphatidylglycerophosphate sy - COG0558 [I] Phosphatidylglycerophosphate synthase
rba-RB5722 0.057 Conserved hypothetical protein GTTGGCACGGCAAGTGCTCAAAggcatcagccgaagcagacctcggcggaagttcgtttttttgaggcgcccgcgcgaaaattgggcggtgtcgagagccgaaagtcgattgttatgagagggattgatgaagccaaggttaaattgttgtttgtgctgaaggtcatcggttggtaacgttaatttaacggaatgttaactttggccccgttgttGTG COG2274 [V] ABC-type bacteriocin/lantibiotic exporters/ contain an N-terminal double-glycine peptidase domain
rba-RB1561 0.08 Ribulose-phosphate 3-epimerase ATTGGCACGGCGATCGCATCACaccaacacaacgtgggcatttcgctgccaaggcggcggggtgcgatcgagaaacgaagtgagcccggtttttgccgtgctcgcagagtgatctcggtcgaacgtccttcgacgtttccatgggccacctcgcgtgttccctgtgtggtgaatccattccccgatgagacaactgtATG COG0036 [G] Pentose-5-phosphate-3-epimerase
rba-RB1559 Probable phosphoglycerate mutase - COG0406 [G] Fructose-2/6-bisphosphatase