AgOrA

An Avant-Garde Oligonucleotides design for ultRA-finest organism detection.

Description

Based on the analysis of the most frequent k-mers within a genomic sequence, AgOrA designs the most suitable oligonucleotides for PCR amplifications that can be used as a fingerprint for the detection of a specific organism

Running Agora

1. Provide data:

Reference Organism

Negative Control Organisms

e-mail to receive the results (optional)

K-Mers

Min frequency

Max number to report

Oligonocleotides

Min lenghth

Max length

Required G/C bases at 3'

Max number to report

MFE hybridization

Overall G/C content

PCR-Product

Min expected size

Max expected size

No data found for

No COG founded for the input sequence, please try again.

Sequence provided is too short, must use a sequence of 40 or more residues.